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Hoechst 33258 (trihydrochloride)

Hoechst 33258 trihydrochloride is a marker dye in Hoechst series. Hoechst is A live nuclear marker dye. Hoechst binds to the grooves in the DNA double strand, which tends to be A/ T-rich DNA strand. Although it binds to all nucleic acids, the A/ T-rich double strand DNA significantly enhances fluorescence intensity Therefore, Hoechst dye can be used for living cell labeling. The fluorescence intensity of Hoechst dye increases with the increase of pH of solution[1].

Product Specifications

CAS Number

[23491-45-4]

Product Name Alternative

BisBenzimide H 33258 trihydrochloride; H 33258 trihydrochloride

UNSPSC

12171500

Hazard Statement

H302, H315, H319, H335

Target

Fluorescent Dye

Type

Dye Reagents

Related Pathways

Others

Applications

Cancer-programmed cell death

Field of Research

Cancer

Assay Protocol

https://www.medchemexpress.com/Hoechst_33258_trihydrochloride.html

Concentration

10mM

Purity

99.71

Solubility

DMSO : 100 mg/mL (ultrasonic) |H2O : 12.5 mg/mL (ultrasonic; warming; heat to 60°C)

Smiles

OC1=CC=C(C2=NC3=CC=C(C4=NC5=CC=C(N6CCN(C)CC6)C=C5N4)C=C3N2)C=C1.[H]Cl.[H]Cl.[H]Cl

Molecular Formula

C25H27Cl3N6O

Molecular Weight

533.88

Precautions

H302, H315, H319, H335

References & Citations

[1]Wang XJ, et al. Newly synthesized bis-benzimidazole derivatives exerting anti-tumor activity through inductionof apoptosis and autophagy. Bioorg Med Chem Lett. 2012 Oct 1;22 (19) :6297-300.|[2]Stolić I, et al. Synthesis, DNA/RNA affinity and antitumour activity of new aromatic diamidines linked by 3,4-ethylenedioxythiophene. Eur J Med Chem. 2011 Feb;46 (2) :743-55.

Shipping Conditions

Room Temperature

Storage Conditions

4°C (Powder, sealed storage, away from moisture and light)

Scientific Category

Dye Reagents

Clinical Information

No Development Reported

Citation 01

Linkoping University. 2025.|Acta Biochim Biophys Sin (Shanghai) . 2019 Aug 5;51 (8) :814-825. |Authorea. 2025 Sep 20.|Biochem Biophys Res Commun. 2020 Jun 30;527 (3) :805-810.|Biochem Biophys Res Commun. 2025 Apr 6:762:151769.|Biochem Cell Biol. 2021 Aug;99 (4) :403-413.|BIOTECHNOLOGY BULLETIN 2018, 34 (12) :172-178|Cancer Manag Res. 2020 Sep 25;12:9097-9111.|Cancer Manag Res. 2020 Sep 28;12:9197-9209.|Chem Eng J. 365 (2019) 270-281.|Discov Oncol. 2025 Feb 18;16 (1) :199.|Food Biosci. 11 December 2021, 101501.|Int Immunopharmacol. 2023 Jun:119:110136.|Int J Biochem Cell Biol. 2017 Mar:84:75-88.|J Cell Biochem. 2019 Jun;120 (6) :9181-9192.|Nat Commun. 2020 Feb 5;11 (1) :719.|Phytomedicine. 2025 Jul:142:156632.|Research Square Preprint. 2020 Jun.|Virulence. 2022 Dec;13 (1) :444-457.

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