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KRAS (G12D) Coupled Nucleotide Exchange Assay Kit

The KRAS (G12D) Coupled Nucleotide Exchange Assay Kit is designed for screening and profiling of KRAS (G12D) antagonists/inhibitors by monitoring the binding of an effector protein such as the Ras binding domain of Raf1, (RBD-cRaf) to KRAS (G12D) . The KRAS (G12D) Coupled Nucleotide Exchange Assay Kit comes in a convenient 384-well format, with enough purified recombinantGDP-loaded KRAS (G12D) Isoform A, GTP, exchange factor SOS1 (amino acids 564-1049), effector protein RBD-cRAF (amino acids 50-140), assay buffer and additives for 400 reactions. With this kit, a few simple steps on a microtiter plate are required for nucleotide exchange detection. First, a sample containing GDP-loaded KRAS (G12D) is incubated with SOS1 and GTP for the nucleotide exchange. Next, RBD-cRAF is added and incubated for the effector-RAS binding. Then, acceptor and donor beads are added and incubated for detection followed by reading the Alpha-counts.SOS1 (son of sevenless) is a guanine nucleotide exchange factor that facilitates the exchange of GDP for GTP. GDP-loaded KRAS (G12D) is in an inactive state and does not interact with the Ras-binding domain (RBD) of cRAF.  SOS1 assists in the release of GDP from KRAS (G12D) so that GTP can occupy the nucleotide binding pocket. This results in a conformational change in KRAS (G12D) that permits its binding to RBD-cRAF. The KRAS (G12D) Coupled Nucleotide Exchange Assay Kit utilizes GST-tagged RBD-cRAF and His-tagged KRAS (G12D) to assay binding of KRAS (G12D) to RBD-cRAF in the Alpha assay. Glutathione acceptor and Ni chelate donor beads are brought into proximal range by the binding of KRAS (G12D) and RBD-cRAF, enabling the energy transfer from the donor to acceptor beads after laser excitation.Figure 1: Illustration of the assay principle.

Product Specifications

Background

It is well established that RAS mutations are responsible for more than 30% of human cancers. KRAS (G12D) is the most common mutation (33%) among KRAS mutant tumors. The G12D mutation favors the activated (GTP-bound) state of KRAS, amplifying signaling pathways that lead to oncogenesis. Recent studies have led to the discovery of a small molecule called MRTX1133 (Mirati) that locks KRAS conformation in the GDP-bound inactive state, thereby blocking KRAS (G12D) -mediated signaling pathway.  Compounds that affect the nucleotide exchange (GDP to GTP) reaction could lead to a novel approach leading to the inhibition of tumor cell growth in KRAS (G12D) driven tumors.

UniProt

P01116

Applications

Screen small molecule inhibitors or antagonists that affect KRAS (G12D) nucleotide-binding status in high throughput screening (HTS) applications.

Format

Catalog #NameAmountStorage101312KRAS (G12D), Isoform A, His-Tag, GDP-Loaded *5 µg-80°C101573SOS1, FLAG-Tag*50 µg-80°C100519RBD-cRAF, GST-Tag*5 µg-80°C79861-210 mM GTP0.5 ml-20°CRBD-RAS Binding Buffer (Incomplete) 2 x 3 ml-20°C0.5 M DTT2 x 200 µl-20°C793113x Immuno Buffer 14 ml-20°C*The concentration of the protein is lot-specific and will be indicated on the tube.

Shipping Conditions

-80°C

Storage Conditions

This assay kit will perform optimally for up to6 monthsfrom date of receipt when the materials are stored as directed. Avoid multiple freeze/ thaw cycles!

Notes

Troubleshooting GuideVisitbpsbioscience.com/assay-kits-faqfor detailed troubleshooting instructions. For all further questions, please email[email protected]

Contraindications

Green and blue dyes, such as Trypan Blue, absorb light in the AlphaScreen® signal emission range (520-620 nm) .Avoid the use of potent singlet oxygen quenchers such as sodium azide (NaN3) or metal ions (Fe2+, Fe3+, Cu2+, Zn2+and Ni2+) . The presence of > 1% RPMI 1640 culture medium leads to a signal reduction due to the presence of excess biotin and iron in this medium. MEM, which lacks these components, does not affect AlphaScreen® assays.The final concentration of DMSO in the reaction should not exceed 1%.
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