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Tubastatin A

Tubastatin A is a potent and selective HDAC6 inhibitor with an IC50 of 15 nM in a cell-free assay, and is selective (1000-fold more) against all other isozymes except HDAC8 (57-fold more) . Tubastatin A also inhibits HDAC10 and metallo-β-lactamase domain-containing protein 2 (MBLAC2) .

Product Specifications

CAS Number

[1252003-15-8]

UNSPSC

12352005

Hazard Statement

H302, H315, H319, H335

Target

Apoptosis; Autophagy; Beta-lactamase; HDAC

Type

Reference compound

Related Pathways

Anti-infection; Apoptosis; Autophagy; Cell Cycle/DNA Damage; Epigenetics

Applications

Cancer-programmed cell death

Field of Research

Cancer

Assay Protocol

https://www.medchemexpress.com/Tubastatin-A.html

Purity

99.07

Solubility

DMSO : 12.5 mg/mL (ultrasonic) |H2O : < 0.1 mg/mL

Smiles

O=C(NO)C1=CC=C(CN2C3=C(CN(C)CC3)C4=C2C=CC=C4)C=C1

Molecular Formula

C20H21N3O2

Molecular Weight

335.40

Precautions

H302, H315, H319, H335

References & Citations

[1]Kyle V. Butler et al. Rational Design and Simple Chemistry Yield a Superior, Neuroprotective HDAC6 Inhibitor, Tubastatin A J. Am. Chem. Soc., 2010, 132 (31), pp 10842-10846|[2]de Zoeten EF, et al. Histone deacetylase 6 and heat shock protein 90 control the functions of Foxp3 (+) T-regulatory cells. Mol Cell Biol. 2011 May;31 (10) :2066-78.|[3]Di Fulvio S, et al. Dysferlin interacts with histone deacetylase 6 and increases alpha-tubulin acetylation. PLoS One. 2011;6 (12) :e28563|[4]Ketene AN, et al. Actin filaments play a primary role for structural integrity and viscoelastic response in cells. Integr Biol (Camb) . 2012 May;4 (5) :540-9.|[5]Kozyreva VK, et al. NEDD9 regulates actin dynamics through cortactin deacetylation in an AURKA/HDAC6-dependent manner. Mol Cancer Res. 2014 May;12 (5) :681-93.|[6]Brijmohan, Angela, et al. Role of HDAC6 in Transcription Factor EB Mediated Clearance of Misfolded Proteins in Chronic Kidney Disease. University of Toronto.Nov-2017.|[7]Lechner S, Malgapo MIP, Grätz C, et al. Target deconvolution of HDAC pharmacopoeia reveals MBLAC2 as common off-target [published online ahead of print, 2022 Apr 28]. Nat Chem Biol. 2022;10.1038/s41589-022-01015-5. |[8]Géraldy M, Morgen M, Sehr P, et al. Selective Inhibition of Histone Deacetylase 10: Hydrogen Bonding to the Gatekeeper Residue is Implicated. J Med Chem. 2019;62 (9) :4426-4443.|[9]Severin Lechner, et al. Target deconvolution of HDAC pharmacopoeia reveals MBLAC2 as common off-target. Nat Chem Biol. 2022 Apr 28.

Shipping Conditions

Room Temperature

Storage Conditions

-20°C, 3 years; 4°C, 2 years (Powder)

Scientific Category

Reference compound1

Clinical Information

No Development Reported

Isoform

HDAC1; HDAC6; HDAC8

Citation 01

Acta Pharm Sin B. 2022 Oct;12 (10) :3891-3904.|Adv Sci (Weinh) . 2025 Aug 7:e02624.|Aging (Albany NY) . 2021 Mar 19;13 (7) :9820-9837.|Am J Pathol. 2020 Dec;190 (12) :2376-2386.|Antioxidants (Basel) . 2022 Apr 7;11 (4) :732.|Antioxidants. 2020 Jul 9;9 (7) :599.|Biochim Biophys Acta Mol Cell Res. 2020 May;1867 (5) :118676.|bioRxiv. 2021 Feb 25.|bioRxiv. 2025 January 31.|bioRxiv. 2025 Jul 12:2025.07.08.663754.|bioRxiv. 2025 Nov 12.|BMC Biol. 2018 Oct 18;16 (1) :116.|Clin Transl Med. 2025 Jan;15 (1) :e70193.|J Dermatol Sci. 2022 Jun;106 (3) :181-188.|J Med Chem. 2023 Dec 14;66 (23) :16075-16090.|J Med Chem. 2024 Sep 12;67 (17) :15098-15117.|J Mol Neurosci. 2024 Mar 13;74 (1) :30.|J Muscle Res Cell Motil. 2025 Nov 13.|J Nutr. 2020 Jul 1;150 (7) :1790-1798.|Medical Science, University of Toronto. 2017 Nov.|Mol Cancer Res. 2014 May;12 (5) :681-93.|Mol Cancer Res. 2022 Jun 3;20 (6) :949-959.|Neurotherapeutics. 2023 Jul;20 (4) :1215-1228.|NPJ Precis Oncol. 2024 Mar 7;8 (1) :66.|Patent. US20180263995A1.|Virulence. 2025 Dec;16 (1) :2495838.|Viruses. 2025 Jan 13;17 (1) :90.|Atherosclerosis. 2021 Jan:317:1-9.|Cell Death Differ. 2025 Jul 30.|Cell Death Dis. 2022 Oct 21;13 (10) :888.|Free Radic Biol Med. 2025 Aug 13:240:59-70.|Front Pharmacol. 2018 Feb 1:9:34.|Hum Mol Genet. 2022 Jun 22;31 (12) :2035-2048.|J Biomed Sci. 2025 Jan 20;32 (1) :9.|J Pathol. 2025 Jun;266 (2) :217-229.|Neurotherapeutics. 2023 Jul;20 (4) :1215-1228.|PLoS Pathog. 2021 Sep 20;17 (9) :e1009940.

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