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Aminoallyl-dUTP-XX-ATTO-488

Aminoallyl-dUTP-XX-ATTO488 is recommended for direct enzymatic labeling of DNA/cDNA e.g. by PCR and Nick Translation. It is incor-porated as substitute for its natural counterpart dTTP. The resulting Dye-labeled DNA/cDNA probes are ideally suited for fluorescence hybridization applications such as FISH or microarray-based gene expression profiling. Optimal substrate properties and thus labeling efficiency is ensured by an optimized linker attached to the C5 position of uridine. Recommended Aminoallyl-dUTP-XX-ATTO488/dTTP ratio for PCR and Nick Translation: 30-50% Aminoallyl-dUTP-XX-ATTO488/70-50% dTTP.

Product Specifications

Product Name Alternative

5- (3-Aminoallyl) -2'-deoxyuridine-5'-triphosphate, labeled with ATTO 488, Triethylammonium salt

Concentration

1.0 mM-1.1 mM

Purity

≥ 95% (HPLC)

Form

Filtered solution (30 kDa) in 10 mM Tris-HCl; Color: yellow; pH: 7.5 ± 0.5

Smiles

C (/C=C/c1cn (c (=O) [nH]c1=O) [C@H]1C[C@@H] ([C@H] (O1) COP (=O) (O) OP (=O) (O) OP (=O) (O) O) O) NC (=O) CCCCCNC (=O) CCCCCNC (=O) CCCN (C (=O) c1c (cccc1) c1c2c (oc3c1ccc (=[NH2+]) c3S (=O) (=O) [O-]) c (c (cc2) N) S (=O) (=O) O) C

Molecular Formula

C49H63N8O25P3S2

Molecular Weight

Theoretical MW: 1321.11 g/mol (free acid) ; Detected MW: 1320.26 g/mol (free acid)

Storage Conditions

Store at -20 °C. Short term exposure (up to 1 week cumulative) to ambient temperature possible

Notes

For research use only.

Applications Notes

Incorporation into DNA/cDNA by: PCR with Taqpolymerasein-house data; Nick Translation with DNAse I/DNA Polymerase Iin-house data. Spectroscopic Propertie: λexc 500 nm, λem 520 nm, ε 90.0 L mmol-1 cm-1 (Tris-HCl pH 7.5) .

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