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Aminoallyl-dUTP-5/6-TAMRA

Aminoallyl-dUTP-5/6-TAMRA is recommended for direct enzymatic labeling of DNA/cDNA by Nick Translation. It is incorporated as substitute for its natural counterpart dTTP. The resulting Dye-labeled DNA/cDNA probes are ideally suited for fluorescence hybridization applications such as FISH or microarray-based gene expression profiling. Optimal substrate properties and thus labeling efficiency is ensured by an optimized linker attached to the C5 position of uridine. Recommended Aminoallyl-dUTP-5/6-TAMRA/dTTP ratio for Nick Translation: 35% Aminoallyl-dUTP-5/6-TAMRA/65% dTTP.

Product Specifications

Product Name Alternative

Tetramethyl-Rhodamine-5-dUTP, 5- (3-Aminoallyl) -2'-deoxyuridine-5'triphosphate, labeled with 5/6-TAMRA, Triethylammonium salt

Concentration

1.0 mM-1.1 mM

Purity

≥ 95% (HPLC)

Form

Filtered solution (30 kDa) in 10 mM Tris-HCl; Color: pink to red; pH: 7.5 ± 0.5

Smiles

C (/C=C/c1cn (c (=O) [nH]c1=O) [C@H]1C[C@@H] ([C@H] (O1) COP (=O) (O) OP (=O) (O) OP (=O) (O) O) O) NC (=O) c1cc (c (cc1) C (=O) [O-]) c1c2c (oc3c1ccc (c3) N (C) C) cc (=[N+] (C) C) cc2.C (/C=C/c1cn (c (=O) [nH]c1=O) [C@H]1C[C@@H] ([C@H] (O1) COP (=O) (O) OP (=O) (O) OP (=O) (O) O) O) NC (=O) c1ccc (c (c1) C (=O) [O-]) c1c2c (oc3c1ccc (c3) N (C) C) cc (=[N+] (C) C) cc2

Molecular Formula

C37H40N5O18P3

Molecular Weight

Theoretical MW: 935.66 g/mol (free acid) ; Detected MW: 935.16 g/mol (free acid)

Storage Conditions

Store at -20 °C

Notes

For research use only.

Applications Notes

Incorporation into DNA/cDNA by Nick Translation with DNAse I/DNA Polymerase Iin-house data. Spectroscopic Propertie: λabs 545 nm, λem 575 nm, ε 90.0 L mmol-1 cm-1 (Tris-HCl pH 7.5) .

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