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PCp-Cy3

PCp-Cy3 is recommended for 3'-End Labeling of RNA/miRNA with T4 RNA Ligase that conjugates a single dye molecule to the 3'-OH group of the RNA/miRNA template. The resulting Dye-labeled RNA/miRNA probes are ideally suited for hybridization experiments such as microarray-based expression profiling or electro mobility shift assays (EMSA) .

Product Specifications

Product Name Alternative

Cytidine-5-phosphate-3- (6-aminohexyl) phosphate, labeled with Cy3, Triethylammonium salt

Concentration

1.0 mM-1.1 mM

Purity

≥ 95% (HPLC)

Form

Solution in 10 mM Tris-HCl; Color: pink; pH: 7.5 ± 0.5

Smiles

C (=C\C=C/1\N (c2c (C1 (C) C) cc (cc2) S (=O) (=O) O) CCCCCC (=O) NCCCCCCOP (=O) (O[C@@H]1[C@@H] (COP (=O) (O) O) O[C@@H] (n2c (=O) nc (N) cc2) [C@@H]1O) O) /C1=* (CC) c2c (C1 (C) C) cc (S (=O) (=O) [O-]) cc2

Molecular Formula

C46H64N6O18P2S2

Molecular Weight

Theoretical MW: 1115.11 g/mol (free acid) ; Detected MW: 1114.32 g/mol (free acid)

Storage Conditions

Store at -20 °C

Notes

For research use only.

Applications Notes

Incorporation into RNA/miRNA by 3'-End Labeling with T4 RNA Ligase. Spectroscopic Propertie: λexc 550 nm, λem 570 nm, ε 150.0 L mmol-1 cm-1 (Tris-HCl pH 7.5) .

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